Summary A short example on running software within a Docker container on a Linux cluster. Since the software is installed within the container no installation is necessary. The computation can be scaled to accommodate large sample files. Docker on Biochemistry Compute Cluster The HTCondor scheduler software on the Biochemistry Compute Cluster (BCC) can run Docker …
Programming for Biology 2019 The famous Cold Spring Harbor Laboratory offers many courses, the course Programming for Biology 2019 was held in October 2019 and this specific course generously offers the course materials online on this site: programmingforbiology.org The course materials covers basics and advanced methods using Unix & Python and provides tutorial materials that include …
Docker Containers I don’t remember how exactly I discovered Docker containers a bit over a year ago, but it seemed a very good system and I immediately saw the potential, then I thought that it would be very good tutorial material. As I am now creating those tutorials “for biologists” I discover a lot of …