TUTORIALS ARE ORGANIZED BY SOFTWARE.
Access these pages either with the menu at right, or by browsing below. Each page will provide tutorial materials in various formats.
Here is an alternate source to learn Unix/Linux bash
command line, as described in my Blog entry: A great Unix tutorial suitable for beginners.
*nix Tutorials - Survival Command Line
There is a lot of power to be had from command line but it can be daunting. This very short, about 1 hour workshop, captures the most helpful commands for a casual use of the Terminal. This would be useful for e.g. those wanting to use Docker. TUTORIAL – Survival command line (last updated: December 3,…
*nix Tutorials - bash basics
Background This series of tutorials are about learning bash the interactive command-line in a Unix-style operating system (Linux or Macintosh, or Windows with added software.) … This workshop is meant to learn and understand basic line commands as they are typed on a text terminal.…
*nix Tutorials - SBGrid
Background SBGrid provides structural biology laboratories with a tested and refined software infrastructure that includes a large library of scientific applications on Linux and MacOS X computers. Some software are accessed with the bash interactive command-line. Note: SBGrid provides a unifed working framework. However, a large number of software is open source and also available…
*nix Tutorials - HTCondor
Background HTCondor is a scheduler system for running batch jobs in distributing computing on large scale computing clusters or grids that enable scientists and engineers to increase their computing throughput. ( See more at What is HTCondor?) Use of the Biochemistry cluster requires using HTCondor to schedule non-interactive jobs. As such knowledge of the bash…