Latest announcements
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Most of this web site is dedicated to tutorial materials, that can be found under the TUTORIALS menu above.
(Newest announcements show at right.
For all posts go to Blog.)
Five ways to run AlphaFold
What is AlphaFold AlphaFold can accurately predict 3D models of protein structures by providing an amino acid sequence. (Ref: Deep Mind.) The AlphaFold network directly predicts the 3D coordinates of all heavy atoms for a …
Centralizing R & Python Data Projects: Posit Cloud Essentials Event
Cloud event Users of RStudio may be interested in this monthly event presented by “Posit” which is the new name of the company that produces RStudio, as the software can be used with many more …
R and Python workshops on Campus – Fall 2023
Summary Workshop Series available on Campus on R and Python: Biochem SSCC UW Libraries R and Python at Biochem R and Python “Clubs” were established in late 2022. The Python Club is currently closed but …
- More Announcements posts
Biochemistry Compute Cluster
The Biochemistry Computational Cluster (BCC) is a High Throughput Computing (HTC) environment available to the Department of Biochemistry and runs non-interactive jobs using HTCondor. …
Workshop subjects
These are a few of the main focus of the workshops in terms of software and areas of study: Molecular Graphics -PyMOL, Chimera, SybylX-, Molecular -Modelling MODELLER-, Data Analysis - R, Python, Markdown, Reproducible Research,…. Guest speakers are invited for additional topics or software demonstration (e.g. EndNote, MatLab…) …
Accessing the Biochemistry Computational Cluster
Please contact Jean-yves Sgro (jsgro@wisc.edu) for authorized access.
Workshops & Registration
Workshops are primarily focused on the needs of Biochemistry personnel from students to faculty, but often extended to Biomolecular Chemistry, Chemistry and other curious minds.
BCRF tutorials are typically two hours long and involve a lot of hands-on practice. All tutorial materials are available for individuals to use after courses or on their own.
Class size is kept small for better interaction and hands-on opportunities but occasionally can be augmented with two or three attendees bringing their laptops.
Interests
- Molecular Graphics
- Computational Methods
- Reproducible Research
Publications
Danger Virus movie: 2 minutes segment featuring Dr. Sgro
Education
- PhD in Cellular and Molecular Biology, 1986
Université Joseph Fourier, Grenoble, France
- EMBL Alumni
European Molecular Biology Laboratory (EMBL-Grenoble)