Docker Containers I don’t remember how exactly I discovered Docker containers a bit over a year ago, but it seemed a very good system and I immediately saw the potential, then I thought that it would be very good tutorial material. As I am now creating those tutorials “for biologists” I discover a lot of …
R Workshops on Campus R is both a language and a softwware environment for statistical computing and graphics. R can be used through the amazing RStudio interface for even more performance, ease and Reproducible Research. In the past years I have offered R and RStudio workshops within the Biochem Department (see links below.) However, multiple …
A small chapter At the turn of the Century (from XX to XXI) I was invited to write a small chapter on the visualization of virus structure for a book that would be published in Spanish called “Principios de Virología” by Professor Jorge Ossa Londoño (CV) from the Universidad de Antioquia. (His UW Alumni Profile “Jorge Ossa …
Blog series This June 2019 marked my 33 years at UW–Madison when I joined Prof. Paul Kaesberg‘s lab as a PostDoc to learn the then new methods of “cloning and sequencing” (i.e. Sanger sequencing.) In this blog I will share memories and stories, images and perhaps (probably useless) software code… as often people ask me …
Summary: The Biochem 660 PyMOL tutorial book has been split in 4 PDFs for easier read and download: Preamble For many years I participated in the teaching of Prof. Ann Palmenberg classes, in particular teaching about molecular graphics on the Desktop at a time when computer use in the classroom was not yet preeminent. This …