CRISPR RNA-guided surveillnace complex, Cascade, bound to a ssDNA target. (PDB ID 4QYZ)

PyMOL

PyMOL Tutorial books

See also post PyMOL Tutorial Books Released (June 20, 2019)

The Biochem 660 PyMOL tutorial book has been split in 4 PDFs for easier read and download:

  • Book 1: Molecular Graphics Essentials (Summary of methods to acquire 3D data; file formats)
  • Book 2: PyMOL part 1 (Graphical representations and atom selection, electrostatic potentials, side-chain mutations, 3D overlays, …)
  • Book 3: PyMOL part 2 (scripts, animations and movies, multimeric structures, morphing)
  • Book 4: PyMOL part 3 (Electron Density Maps)

On-line hand-outs:

Added note: Parts 1-3 of the hand outs correspond altogether to books 2 and 3 above (PyMOL parts 1 and 2)

PyMOL_part 1 (of 3)

PyMOL_part 2 (of 3)

PyMOL_part 3 (of 3)

(PYMOL sections last updated: September | October 2017)